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20-Bio-A5 Systems Analysis & Control · December 2017

Question 3 of 6: Immobilized-Enzyme Batch Reactor with Enzyme Deactivation

Nivaar worked solution (AI-drafted; not reviewed by a licensed engineer)

Notes on this paper

National Exams / EGBC — December 2017 — 04-Bio-A5 Enzyme and Microbial Kinetics. Three-hour open-book examination; any non-communicating calculator is permitted. Six questions constitute a complete paper. Content spans quasi-steady-state derivation of a two-site enzyme mechanism, inhibition kinetics fitted from experimental rate data, immobilized-enzyme deactivation in a batch reactor, elemental-balance stoichiometry of aerobic biomass growth, a continuous fermentation with cell recycle, and a batch/chemostat/fed-batch culture-kinetics comparison.

Reference texts: Bailey & Ollis, Biochemical Engineering Fundamentals (2nd ed.) — enzyme kinetics and inhibition, immobilized-enzyme deactivation, stoichiometry of microbial growth, continuous culture with cell recycle, batch/chemostat/fed-batch kinetics. All quantities are used exactly as printed on the exam.

Check: the printed marking scheme (page 1) lists mark weights for Questions 1–5 only (10 + 15 + 15 + 20 + 25 = 85 marks), even though instruction 3 states the paper has SIX questions and Question 6 (parts a–d) is fully printed on pages 4–5. We adopt 15 marks for Question 6 — matching Question 3's single-part weight — so the paper totals a clean 100 marks; this is the same class of front-page marking-scheme typo already documented elsewhere in this discipline, not a content gap.

Question 3: Immobilized-Enzyme Batch Reactor with Enzyme Deactivation (15 marks)

Question text not reproduced: the examination questions are © Engineers and Geoscientists BC. Open the official past paper (linked at the top of this page) to read the question, then follow the worked solution below.

Given. First-order surface rate law $-r_s=V_m'S_wA_T/K_m$ with $S_w=S_b=S$ (well mixed); first-order enzyme deactivation $dV_m'/dt=-k_1V_m'$; initial substrate concentration $S_0$ at $t=0$; the list of standard integrals printed on the exam's final page.

Find. Show that $S\to S_{min}=S_0\exp[-A_TV_{m,0}/(k_1K_m)]$ as $t\to\infty$.

Approach. Write the batch substrate balance using the (already per-unit-reactor-volume) first-order rate law, substitute the exponentially decaying $V_m'(t)$, separate variables, and integrate over all time using the supplied $\int e^{ax}dx$ formula.

  1. Enzyme deactivation. Integrating $dV_m'/dt=-k_1V_m'$ from $V_m'(0)=V_{m,0}$ gives the standard first-order decay $$V_m'(t)=V_{m,0}e^{-k_1t}.$$
  2. Batch substrate balance. The stated rate law carries no explicit reactor-volume term, so it is already expressed on a per-unit-reactor-volume basis and the batch balance is simply $$\frac{dS}{dt}=-(-r_s)=-\frac{V_m'(t)\,A_T\,S}{K_m}=-\frac{A_TV_{m,0}}{K_m}\,e^{-k_1t}\,S.$$
  3. Separate variables. $$\frac{dS}{S}=-\frac{A_TV_{m,0}}{K_m}\,e^{-k_1t}\,dt.$$
  4. Integrate from $t=0$ ($S=S_0$) to $t\to\infty$ ($S\to S_{min}$, the value approached once the enzyme has essentially fully deactivated). $$\ln\frac{S_{min}}{S_0}=-\frac{A_TV_{m,0}}{K_m}\int_0^\infty e^{-k_1t}\,dt.$$
  5. Evaluate the integral with the supplied formula $\int_{x_1}^{x_2}e^{ax}dx=\tfrac1a(e^{ax_2}-e^{ax_1})$, taking $a=-k_1$: as $t\to\infty$, $e^{-k_1t}\to0$, so $$\int_0^\infty e^{-k_1t}\,dt=\frac{1}{k_1}.$$
  6. Substitute back. $$\ln\frac{S_{min}}{S_0}=-\frac{A_TV_{m,0}}{k_1K_m} \quad\Rightarrow\quad \boxed{S_{min}=S_0\exp\!\left(-\dfrac{A_TV_{m,0}}{k_1K_m}\right)}$$ — exactly the target expression. A finite, nonzero $S_{min}$ (rather than complete conversion) is the direct physical consequence of the enzyme's activity dying out before all of the substrate can be consumed.
ResultExpression
Minimum substrate concentration $S_{min}$$S_0\exp[-A_TV_{m,0}/(k_1K_m)]$ (confirmed, matches target)